from memory , Yanks specifies only the colours he want to replace , so if you tell to ignore the skin it would.
Even if it was just a visual feedback for the player and that there not really wearing those colours in game, Just think i could make all my medics have red suits, my main snipers could be wearing black, etc OR you could create colour teams , red team goes east blue team will serrp the UFO ... This would make it easier to see who is who when scrolling through a map, just activate this with a toggle button on or off.