Enjoying the mod immensely, especially the early choices between selling UFO parts and breaking them down for codex fragments, and between using the fragments/alloys to make better equipment versus using the materials to tech up. Also, love the PDWs as starting weapons, I was a fan of giving probably more soldiers than I should the SMGs in Final Mod Pack, it's great that you enabled these weapons as a viable alternative to the assault rifles.
Question: if I clean out the temple instead of bombing the codex, do I get a windfall of some sort? Does the transmitter get added to my inventory?
Just completed a codex recovery where I cleared out all the floaters without destroying the device, I didn't see any extra loot from the mission.